Code Structure
The library consists of three modules, the syntactic check module, the semantic check module,
and the object representation module for (de-)serialisation.
Object Representation Overview
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"mzqc.MZQCFile.AnalysisSoftware" [URL="package.html#mzqc.MZQCFile.AnalysisSoftware",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="AnalysisSoftware Object representation for mzQC schema type AnalysisSoftware"];
"mzqc.MZQCFile.CvParameter" -> "mzqc.MZQCFile.AnalysisSoftware" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.BaseQuality" [URL="package.html#mzqc.MZQCFile.BaseQuality",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="BaseQuality Object representation for mzQC schema type BaseQuality"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.BaseQuality" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.ControlledVocabulary" [URL="package.html#mzqc.MZQCFile.ControlledVocabulary",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="ControlledVocabulary Object representation for mzQC schema type ControlledVocabulary"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.ControlledVocabulary" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.CvParameter" [URL="package.html#mzqc.MZQCFile.CvParameter",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="CvParameter Object representation for mzQC schema type CvParameter"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.CvParameter" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.InputFile" [URL="package.html#mzqc.MZQCFile.InputFile",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="InputFile Object representation for mzQC schema type InputFile"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.InputFile" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.JsonSerialisable" [URL="package.html#mzqc.MZQCFile.JsonSerialisable",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="JsonSerialisable Main structure template for mzQC objects"];
"mzqc.MZQCFile.MetaDataParameters" [URL="package.html#mzqc.MZQCFile.MetaDataParameters",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="MetaDataParameters Object representation for mzQC schema type MetaDataParameters"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.MetaDataParameters" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.MzQcFile" [URL="package.html#mzqc.MZQCFile.MzQcFile",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="MzQcFile Object representation for mzQC schema type MzQcFile"];
"mzqc.MZQCFile.jsonobject" -> "mzqc.MZQCFile.MzQcFile" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.MzqcJSONEncoder" [URL="package.html#mzqc.MZQCFile.MzqcJSONEncoder",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="MzqcJSONEncoder The encoder used to facilitate indented encoding "];
"json.encoder.JSONEncoder" -> "mzqc.MZQCFile.MzqcJSONEncoder" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.QualityMetric" [URL="package.html#mzqc.MZQCFile.QualityMetric",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="QualityMetric Object representation is passed for its more concrete derivatives"];
"mzqc.MZQCFile.CvParameter" -> "mzqc.MZQCFile.QualityMetric" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.RunQuality" [URL="package.html#mzqc.MZQCFile.RunQuality",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="QualityMetric Object representation is passed for its more general basis"];
"mzqc.MZQCFile.BaseQuality" -> "mzqc.MZQCFile.RunQuality" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.SetQuality" [URL="package.html#mzqc.MZQCFile.SetQuality",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="SetQuality Object representation is passed for its more general basis"];
"mzqc.MZQCFile.BaseQuality" -> "mzqc.MZQCFile.SetQuality" [arrowsize=0.5,style="setlinewidth(0.5)"];
"mzqc.MZQCFile.jsonobject" [URL="package.html#mzqc.MZQCFile.jsonobject",fillcolor=white,fontname="Vera Sans, DejaVu Sans, Liberation Sans, Arial, Helvetica, sans",fontsize=10,height=0.25,shape=box,style="setlinewidth(0.5),filled",target="_top",tooltip="jsonobject Proxy object for better integration of mzQC objects"];
}
