Welcome to mzQC’s python library documentation!

Contents:

• Introduction
  • MZQC python library
    • Install
    • Online docs
    • Development
• Usage Examples
  • Load
  • Access elements
  • Store
• Code Structure
  • Object Representation Overview
• pymzqc Modules
  • mzqc.MZQCFile submodule
    • AnalysisSoftware
    • BaseQuality
    • ControlledVocabulary
    • CvParameter
    • InputFile
    • JsonObject
    • JsonSerialisable
    • MetaDataParameters
    • MzQcFile
    • MzqcJSONEncoder
    • QualityMetric
    • RunQuality
    • SetQuality
    • rectify()
  • mzqc.SemanticCheck submodule
    • SemanticCheck
    • SemanticIssue
    • suppress_verbose_modules()
  • mzqc.SyntaxCheck submodule
    • SyntaxCheck
  • pymzqc Accessories Module
• Build and Container
  • Container
    • Container use
  • Build
    • How to build and release
• Accessories
  • File-handling tools
    • Fileinfo
    • Filemerger
    • Fixdescriptions
  • Validator
    • Local validation
  • Validator API (formerly heroku)
    • Simple mzqc-validator API
• Notebooks
  • Jupyter python notebooks
  • read mzQC notebook example
  • write mzQC notebook example

Indices and tables

• Module Index

• Search Page